CDS

Accession Number TCMCG021C06859
gbkey CDS
Protein Id XP_010913736.1
Location complement(join(48249488..48250241,48262576..48262731,48263293..48263454,48263574..48263704,48265525..48265630,48265720..48265819,48265893..48266018,48266268..48266471,48267170..48267257,48267479..48267527,48267608..48267700,48273773..48273856,48275915..48275973,48276232..48276266,48276355..48276479,48279096..48279171,48279808..48279963,48280692..48280698,48280818..48280855,48280947..48281026,48281950..48282021,48282300..48282391,48282579..48282653,48284703..48284839,48284957..48285042,48285440..48285531,48286374..48286709))
Gene LOC105039319
GeneID 105039319
Organism Elaeis guineensis

Protein

Length 1172aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA268357
db_source XM_010915434.3
Definition DNA ligase 4 isoform X1 [Elaeis guineensis]

EGGNOG-MAPPER Annotation

COG_category L
Description DNA ligase
KEGG_TC -
KEGG_Module -
KEGG_Reaction R00381        [VIEW IN KEGG]
KEGG_rclass RC00005        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10777        [VIEW IN KEGG]
EC 6.5.1.1        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03450        [VIEW IN KEGG]
map03450        [VIEW IN KEGG]
GOs GO:0000726        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003909        [VIEW IN EMBL-EBI]
GO:0003910        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005576        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006266        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006289        [VIEW IN EMBL-EBI]
GO:0006297        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006303        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010165        [VIEW IN EMBL-EBI]
GO:0010212        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016886        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0032807        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048046        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051103        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACAGATGAGACGGTAAGATTCGGGGTTCTGGGCAGTATGTTCGAGGCGATGGTGAGGGATCGGTCGGCGGCGAAGAAACGGAAGCGGTTCAGGACGCTGCTGGATCGGGTGTACACGGGGCGGGACTACTTTAGCGCCGTTCGGCTCATCCTCCCGGGCCTCGACCGGGAGCGCGGCTCGTACGGGCTCAAGGAGTCCGCCCTCGCTGCCGCCCTTGTCGACGCCCTCGGACTGGCCAAGGACTCTCCCGACGCCCTCCGCCTTATCAACTGGCGCAAGGGCGGCGCCCGTTCGGGTGCCAACGCCGGCAACTTCGCCCTTGTCGCCGCCGAGGTTCTACAGCGTAGGCAAGGAATGGCTTCTGGTGGGCTTACAATCAAGGAGTTGAATGATGCTCTTGATCAAATAGCCTCAAAAGAAAATAGGGCAGAGAAGACTGCTGTTCTTGCTAGTCTCATTAAGAAAACAAATGCCCAGGAAATGAAGTGGATTCTAATGATCATTCTTAAAGATCTGAAGCTGGGGATTAGTGAGAAGAGTATATTTCATGAGTTTCACCCAGATGCTGAAGATTTGTTCAATGTCACTTGTGACCTAAAATTAGTCTGTGAAAAGCTGAAAGATCGAAGTCAACGTCATAAACGGCAGGATATAGAAGTGGGAAAAGCTGTAAGGCCTCAGCTAGCTATGAGGGTCGGTGATGCTGCAACTGCATGGAGGAAGCTTCATGGAAAGCATGTGGTTGTCGAGTGCAAGTTTGATGGTGATCGCATTCAAATCCACAAGAACGGAGAAGAGATTCACTTTTTTTCACGGAATTTTCTCGATCATCCCGAATACGAACATGGCATGTCGAACATTATTTTACAGAACATCACTGTTGAGAGGTGTATTCTGGATGGTGAAATGCTCGTTTGGGACACCTCAACTCAACGTTTTGCAGAATTTGGTTCAAATCAGGAAATAGCAAAGGCAGCTAGAGAAGGATTAGAGAGTGACCGCCAGCTATGCTATGTTGCATTTGATATTCTTTATGTCGGAGACACTAGTGTTATTCATCAGAGCTTGACAGAAAGACTTGACCTTCTGCGAAAAGTTGTAAAACCTTTGAAGGGTCGCTTAGAAATTCTGACCCCTAATGGGGGTCTTAATGATCGTCGTTTGCAAGGCGAGCCATGTTGGTCCCTTGTTGCTTACACTGTGGAAGATGTGGAGAGATTTTTCAAAGAAACTATTGAAAATAGAGATGAGGGGATTGTGTTGAAGGACCTTGGTTCCAAATGGGAACCTGGTGATCGAAGTGGAAAGTGGTTGAAGTTGAAACCTGATTACATACATGCTGGTGCTGATCTGGATGTGCTTGTCATAGGAGGATATTTTGGTTCTGGCCGTCATGGAGGAGAGGTAGCTCAGTTTTTGGTGGGTCTTGCGACGCGTTCAGATTCTACCAGCTATCCAAACCGATTTGTTTCATTCTGTCGAGTTGGTACTGGTCTCTCTGACGAGGAGCTTGATGCTCTCATTACGAAATTGAAGCCTTATTTCAGGAAGAATGAATATCCAAAAAAAGTGCCACCCTTTTATGAAGTCACAAATAATTCAAAGGAGAGGCCAGATGTTTGGATTGACAGCCCTGACAAATCGGTCATACTTTCTATAACTAGCGATATCCGAACTATAAAGTCTGAGGTATTTGCCGCACCATACAGTTTGAGATTTCCACGCATTCATCGTGTGAGATATGACAAGCCATGGCATGAGTGCCTTGATGTGCAGTCATTCGTAGACTTGGTACATTCAAGCAATGGGAATACACAGAGGGGAACAGATCATGGAGGTCTGCAAAATCATGGATCAAAACGTGTGAAGTCCACCAAGAAGGGAGAGAAGAAAAATTTATCCATTGTCCCTGCTCATTTGATCCATACTGACATCTCTGGTGTTAAGGAGGAGACCCTCATATTTGCAAATATGATGTTCTATTTTATCAATGTTCCTCCATCCTATTCTGTAGACTACTTTCACAAAATTGTGGTTGAGAATGGGGGAACTTTCTCAATGAATCTCAATGACTCAGTTACTCACTGCATTGCAGCTGAAAGAAAAGGGATCAAGTATCAAGCTGCTATGCATCATGGAGATATCATTCACTATTCTTGGGTCTTGGATTGTTGCAAACAAAAGCATCTTCTACATTTGCAACCGAAGTACTACCTATTTCTTGCAGATTCTTCAAAGAGCAAGTTTCGGGAGGAGATTGACACGTTCTCTGATTATTATTACTGGGATATAGATATTGCAGACATTAAACAGATATTCAGCAATATGCATGGACCAGAATATACGAACAACATAGATTATTATAAGAAGAAGTACTGTCCAGTGGAAACATTGTGCTTGTTTCAGGGTTGTTGTGTTTACTTCTACAAATCAATGTCTGTTATAAATACATGCGGTGAAGTAATATTAGAGCTTGCTTTAAGGAGGATGAGGCTTGAAATAACCATGCATGGTGGTGAAGTTTGCAGCAGTCTTCAACATGCCACTCATTTGATTGTGTATTCAACAACAAAAGAAGCCAACAACTTTGATGAAATATATAAAAGTTTTCCATCTTCTCAAAGACACCTACTACATGACAGTAGGCTACATGTTGTGATGCATCAATGGTTGGAAGATTCATTAGAAAGAGGCAAGAAGTTGCACGAAGATTCTTATAACTTGAAGCCTGATACCTTTGAAGAAATTAAGATTGATGAGAGGCACAATCTCATATCTCCTGTAACTACAAGCAATGCAGAAAAACAGTGTGTCTCTAGACTAAATATAGGTGAAAAGAAGAAAAGAGATAGGCCCATGCATGCTGATGCAAGAAAGGGTAGAACGGGTCCAAAACTCACACGAAGAACACGGGCAAGGATTGGAAACAGACCTGCAAAAATAGATGCAGATGAAGCAGAGAACAGTGATTGCTCAGATGAAACTTCTATGGGTAAAATCCTGAAGTCAAGAAAAGAGTCTAACATTGACATCACAGAAAGTGCAGGGATCAAAGATCAAGAATCATTTTCAGATGAAAGTAGTCAAAGAGGAGCCTTAGGATCAAGGAAAGAGTCTAAAGGTGACATGGAGGAAAGTGAGGATATCAAATATCAAGCACCGCATTTTAGTATTCAAGCAGCTGAGTGTCATGCAGGGTCTCAGAATGTACATTTAACTGATTGTGATAAAAAGTCAGAAGCACCAGAAGATATAACCAATGAAAGGTTTGACAATGTGCAAACAGTGCATGTCACAGAAACAGGAACTAAAGGAACTGGTGAAAAAATTGAACAAATTGTTGACCCACTGCATGCTATGTTATTAGATATGATACCAAGTCTTAGCCAGAACAATGCGGAAACTGGAAGCTCCATTCCTGAAGGCAAGGAAACACAGCCAGATCTCCACACCAACCCAGTGAAGAAGAAAGTTAGCTACAAAGATGTTGCAGGTCAACTCCTCAAAGATTGGTAA
Protein:  
MTDETVRFGVLGSMFEAMVRDRSAAKKRKRFRTLLDRVYTGRDYFSAVRLILPGLDRERGSYGLKESALAAALVDALGLAKDSPDALRLINWRKGGARSGANAGNFALVAAEVLQRRQGMASGGLTIKELNDALDQIASKENRAEKTAVLASLIKKTNAQEMKWILMIILKDLKLGISEKSIFHEFHPDAEDLFNVTCDLKLVCEKLKDRSQRHKRQDIEVGKAVRPQLAMRVGDAATAWRKLHGKHVVVECKFDGDRIQIHKNGEEIHFFSRNFLDHPEYEHGMSNIILQNITVERCILDGEMLVWDTSTQRFAEFGSNQEIAKAAREGLESDRQLCYVAFDILYVGDTSVIHQSLTERLDLLRKVVKPLKGRLEILTPNGGLNDRRLQGEPCWSLVAYTVEDVERFFKETIENRDEGIVLKDLGSKWEPGDRSGKWLKLKPDYIHAGADLDVLVIGGYFGSGRHGGEVAQFLVGLATRSDSTSYPNRFVSFCRVGTGLSDEELDALITKLKPYFRKNEYPKKVPPFYEVTNNSKERPDVWIDSPDKSVILSITSDIRTIKSEVFAAPYSLRFPRIHRVRYDKPWHECLDVQSFVDLVHSSNGNTQRGTDHGGLQNHGSKRVKSTKKGEKKNLSIVPAHLIHTDISGVKEETLIFANMMFYFINVPPSYSVDYFHKIVVENGGTFSMNLNDSVTHCIAAERKGIKYQAAMHHGDIIHYSWVLDCCKQKHLLHLQPKYYLFLADSSKSKFREEIDTFSDYYYWDIDIADIKQIFSNMHGPEYTNNIDYYKKKYCPVETLCLFQGCCVYFYKSMSVINTCGEVILELALRRMRLEITMHGGEVCSSLQHATHLIVYSTTKEANNFDEIYKSFPSSQRHLLHDSRLHVVMHQWLEDSLERGKKLHEDSYNLKPDTFEEIKIDERHNLISPVTTSNAEKQCVSRLNIGEKKKRDRPMHADARKGRTGPKLTRRTRARIGNRPAKIDADEAENSDCSDETSMGKILKSRKESNIDITESAGIKDQESFSDESSQRGALGSRKESKGDMEESEDIKYQAPHFSIQAAECHAGSQNVHLTDCDKKSEAPEDITNERFDNVQTVHVTETGTKGTGEKIEQIVDPLHAMLLDMIPSLSQNNAETGSSIPEGKETQPDLHTNPVKKKVSYKDVAGQLLKDW